10 PGraph Graph = PGraph::TObj::New();
12 const TAttrType NodeType = Table->GetColType(SrcCol);
13 Assert(NodeType == Table->GetColType(DstCol));
14 const TInt SrcColIdx = Table->GetColIdx(SrcCol);
15 const TInt DstColIdx = Table->GetColIdx(DstCol);
18 if (NodeType ==
atInt) {
19 for (
int CurrRowIdx = 0; CurrRowIdx < (Table->Next).Len(); CurrRowIdx++) {
20 if ((Table->Next)[CurrRowIdx] == Table->Invalid) {
continue; }
22 TInt SVal = (Table->IntCols)[SrcColIdx][CurrRowIdx];
23 TInt DVal = (Table->IntCols)[DstColIdx][CurrRowIdx];
25 Graph->AddNodeUnchecked(SVal);
26 Graph->AddNodeUnchecked(DVal);
27 Graph->AddEdgeUnchecked(SVal, DVal);
29 }
else if (NodeType ==
atFlt) {
33 for (
int CurrRowIdx = 0; CurrRowIdx < (Table->Next).Len(); CurrRowIdx++) {
34 if ((Table->Next)[CurrRowIdx] == Table->Invalid) {
continue; }
37 TFlt FSVal = (Table->FltCols)[SrcColIdx][CurrRowIdx];
38 SVal = Table->CheckAndAddFltNode(Graph, FltNodeVals, FSVal);
39 TFlt FDVal = (Table->FltCols)[SrcColIdx][CurrRowIdx];
40 DVal = Table->CheckAndAddFltNode(Graph, FltNodeVals, FDVal);
41 Graph->AddEdge(SVal, DVal);
44 for (
int CurrRowIdx = 0; CurrRowIdx < (Table->Next).Len(); CurrRowIdx++) {
45 if ((Table->Next)[CurrRowIdx] == Table->Invalid) {
continue; }
47 TInt SVal = (Table->StrColMaps)[SrcColIdx][CurrRowIdx];
49 TInt DVal = (Table->StrColMaps)[DstColIdx][CurrRowIdx];
52 Graph->AddNodeUnchecked(SVal);
53 Graph->AddNodeUnchecked(DVal);
54 Graph->AddEdgeUnchecked(SVal, DVal);
58 Graph->SortNodeAdjV();
63 template<
class PGraph>
65 const TStr& SrcCol,
const TStr& DstCol,
69 PGraph Graph = PGraph::TObj::New();
71 const TAttrType NodeType = Table->GetColType(SrcCol);
72 Assert(NodeType == Table->GetColType(DstCol));
73 const TInt SrcColIdx = Table->GetColIdx(SrcCol);
74 const TInt DstColIdx = Table->GetColIdx(DstCol);
90 for (
int CurrRowIdx = 0; CurrRowIdx < (Table->Next).Len(); CurrRowIdx++) {
91 if ((Table->Next)[CurrRowIdx] == Table->Invalid) {
97 if (NodeType ==
atFlt) {
98 TFlt FSVal = (Table->FltCols)[SrcColIdx][CurrRowIdx];
99 SVal = Table->CheckAndAddFltNode(Graph, FltNodeVals, FSVal);
100 TFlt FDVal = (Table->FltCols)[SrcColIdx][CurrRowIdx];
101 DVal = Table->CheckAndAddFltNode(Graph, FltNodeVals, FDVal);
102 }
else if (NodeType ==
atInt || NodeType ==
atStr) {
103 if (NodeType ==
atInt) {
104 SVal = (Table->IntCols)[SrcColIdx][CurrRowIdx];
105 DVal = (Table->IntCols)[DstColIdx][CurrRowIdx];
107 SVal = (Table->StrColMaps)[SrcColIdx][CurrRowIdx];
108 if (strlen(Table->GetContextKey(SVal)) == 0) {
continue; }
109 DVal = (Table->StrColMaps)[DstColIdx][CurrRowIdx];
110 if (strlen(Table->GetContextKey(DVal)) == 0) {
continue; }
112 if (!Graph->IsNode(SVal)) {Graph->AddNode(SVal); }
113 if (!Graph->IsNode(DVal)) {Graph->AddNode(DVal); }
119 Graph->AddEdge(SVal, DVal, CurrRowIdx);
122 for (
TInt i = 0; i < EdgeAttrV.
Len(); i++) {
123 TStr ColName = EdgeAttrV[i];
124 TAttrType T = Table->GetColType(ColName);
125 TInt Index = Table->GetColIdx(ColName);
128 Graph->AddIntAttrDatE(CurrRowIdx, Table->IntCols[Index][CurrRowIdx], ColName);
131 Graph->AddFltAttrDatE(CurrRowIdx, Table->FltCols[Index][CurrRowIdx], ColName);
134 Graph->AddStrAttrDatE(CurrRowIdx, Table->GetStrValIdx(Index, CurrRowIdx), ColName);
140 if ((Table->SrcNodeAttrV).Len() > 0) {
141 Table->AddNodeAttributes(SVal, Table->SrcNodeAttrV, CurrRowIdx, NodeIntAttrs, NodeFltAttrs, NodeStrAttrs);
144 if ((Table->DstNodeAttrV).Len() > 0) {
145 Table->AddNodeAttributes(DVal, Table->DstNodeAttrV, CurrRowIdx, NodeIntAttrs, NodeFltAttrs, NodeStrAttrs);
150 if ((Table->SrcNodeAttrV).Len() > 0 || (Table->DstNodeAttrV).Len() > 0) {
151 for (
TNEANet::TNodeI NodeI = Graph->BegNI(); NodeI < Graph->EndNI(); NodeI++) {
152 TInt NId = NodeI.GetId();
153 if (NodeIntAttrs.
IsKey(NId)) {
156 TInt AttrVal = Table->AggregateVector<
TInt>(it.GetDat(), AggrPolicy);
157 Graph->AddIntAttrDatN(NId, AttrVal, it.GetKey());
160 if (NodeFltAttrs.
IsKey(NId)) {
163 TFlt AttrVal = Table->AggregateVector<
TFlt>(it.GetDat(), AggrPolicy);
164 Graph->AddFltAttrDatN(NId, AttrVal, it.GetKey());
167 if (NodeStrAttrs.
IsKey(NId)) {
170 TStr AttrVal = Table->AggregateVector<
TStr>(it.GetDat(), AggrPolicy);
171 Graph->AddStrAttrDatN(NId, AttrVal, it.GetKey());
181 template<
class PGraph>
186 return ToNetwork<PGraph>(Table, SrcCol, DstCol, V, AggrPolicy);
190 template<
class PGraphMP>
194 const TInt SrcColIdx = Table->GetColIdx(SrcCol);
195 const TInt DstColIdx = Table->GetColIdx(DstCol);
196 const TAttrType NodeType = Table->GetColType(SrcCol);
197 Assert(NodeType == Table->GetColType(DstCol));
199 const TInt NumRows = Table->NumValidRows;
201 TIntV SrcCol1, DstCol1, SrcCol2, DstCol2;
203 #pragma omp parallel sections num_threads(4)
206 { SrcCol1.
Reserve(NumRows, NumRows); }
208 { SrcCol2.
Reserve(NumRows, NumRows); }
210 { DstCol1.
Reserve(NumRows, NumRows); }
212 { DstCol2.
Reserve(NumRows, NumRows); }
219 Table->GetPartitionRanges(Partitions, omp_get_max_threads());
220 TInt PartitionSize = Partitions[0].GetVal2()-Partitions[0].GetVal1()+1;
225 omp_set_num_threads(omp_get_max_threads());
226 if (NodeType ==
atInt) {
227 #pragma omp parallel for schedule(static)
228 for (
int i = 0; i < Partitions.
Len(); i++) {
231 while (RowI < EndI) {
241 else if (NodeType ==
atStr) {
242 #pragma omp parallel for schedule(static)
243 for (
int i = 0; i < Partitions.
Len(); i++) {
246 while (RowI < EndI) {
257 omp_set_num_threads(omp_get_max_threads());
260 #pragma omp single nowait
262 #pragma omp task untied shared(SrcCol1, DstCol1)
265 #pragma omp single nowait
267 #pragma omp task untied shared(SrcCol2, DstCol2)
284 TInt NumThreads = omp_get_max_threads();
285 TInt PartSize = (NumRows/NumThreads);
287 TIntV SrcOffsets, DstOffsets;
289 for (
TInt i = 1; i < NumThreads; i++) {
290 TInt CurrOffset = i * PartSize;
291 while (CurrOffset < (i+1) * PartSize &&
292 SrcCol1[CurrOffset-1] == SrcCol1[CurrOffset]) {
295 if (CurrOffset < (i+1) * PartSize) { SrcOffsets.
Add(CurrOffset); }
297 SrcOffsets.
Add(NumRows);
300 for (
TInt i = 1; i < NumThreads; i++) {
301 TInt CurrOffset = i * PartSize;
302 while (CurrOffset < (i+1) * PartSize &&
303 DstCol2[CurrOffset-1] == DstCol2[CurrOffset]) {
306 if (CurrOffset < (i+1) * PartSize) { DstOffsets.
Add(CurrOffset); }
308 DstOffsets.
Add(NumRows);
310 TInt SrcPartCnt = SrcOffsets.
Len()-1;
311 TInt DstPartCnt = DstOffsets.
Len()-1;
322 TIntV SrcNodeCounts, DstNodeCounts;
323 SrcNodeCounts.
Reserve(SrcPartCnt, SrcPartCnt);
324 DstNodeCounts.
Reserve(DstPartCnt, DstPartCnt);
326 #pragma omp parallel for schedule(dynamic)
327 for (
int t = 0; t < SrcPartCnt+DstPartCnt; t++) {
328 if (t < SrcPartCnt) {
330 if (SrcOffsets[i] != SrcOffsets[i+1]) {
331 SrcNodeCounts[i] = 1;
332 TInt CurrNode = SrcCol1[SrcOffsets[i]];
333 for (
TInt j = SrcOffsets[i]+1; j < SrcOffsets[i+1]; j++) {
334 while (j < SrcOffsets[i+1] && SrcCol1[j] == CurrNode) { j++; }
335 if (j < SrcOffsets[i+1]) {
337 CurrNode = SrcCol1[j];
342 TInt i = t - SrcPartCnt;
343 if (DstOffsets[i] != DstOffsets[i+1]) {
344 DstNodeCounts[i] = 1;
345 TInt CurrNode = DstCol2[DstOffsets[i]];
346 for (
TInt j = DstOffsets[i]+1; j < DstOffsets[i+1]; j++) {
347 while (j < DstOffsets[i+1] && DstCol2[j] == CurrNode) { j++; }
348 if (j < DstOffsets[i+1]) {
350 CurrNode = DstCol2[j];
366 TInt TotalSrcNodes = 0;
368 for (
int i = 0; i < SrcPartCnt; i++) {
369 SrcIdOffsets.
Add(TotalSrcNodes);
370 TotalSrcNodes += SrcNodeCounts[i];
373 TInt TotalDstNodes = 0;
375 for (
int i = 0; i < DstPartCnt; i++) {
376 DstIdOffsets.
Add(TotalDstNodes);
377 TotalDstNodes += DstNodeCounts[i];
382 TIntPrV SrcNodeIds, DstNodeIds;
383 #pragma omp parallel sections
386 { SrcNodeIds.
Reserve(TotalSrcNodes, TotalSrcNodes); }
388 { DstNodeIds.
Reserve(TotalDstNodes, TotalDstNodes); }
391 #pragma omp parallel for schedule(dynamic)
392 for (
int t = 0; t < SrcPartCnt+DstPartCnt; t++) {
393 if (t < SrcPartCnt) {
395 if (SrcOffsets[i] != SrcOffsets[i+1]) {
396 TInt CurrNode = SrcCol1[SrcOffsets[i]];
397 TInt ThreadOffset = SrcIdOffsets[i];
398 SrcNodeIds[ThreadOffset] =
TIntPr(CurrNode, SrcOffsets[i]);
400 for (
TInt j = SrcOffsets[i]+1; j < SrcOffsets[i+1]; j++) {
401 while (j < SrcOffsets[i+1] && SrcCol1[j] == CurrNode) { j++; }
402 if (j < SrcOffsets[i+1]) {
403 CurrNode = SrcCol1[j];
404 SrcNodeIds[ThreadOffset+CurrCount] =
TIntPr(CurrNode, j);
410 TInt i = t - SrcPartCnt;
411 if (DstOffsets[i] != DstOffsets[i+1]) {
412 TInt CurrNode = DstCol2[DstOffsets[i]];
413 TInt ThreadOffset = DstIdOffsets[i];
414 DstNodeIds[ThreadOffset] =
TIntPr(CurrNode, DstOffsets[i]);
416 for (
TInt j = DstOffsets[i]+1; j < DstOffsets[i+1]; j++) {
417 while (j < DstOffsets[i+1] && DstCol2[j] == CurrNode) { j++; }
418 if (j < DstOffsets[i+1]) {
419 CurrNode = DstCol2[j];
420 DstNodeIds[ThreadOffset+CurrCount] =
TIntPr(CurrNode, j);
432 Nodes.
Reserve(TotalSrcNodes+TotalDstNodes);
438 while (i < TotalSrcNodes && j < TotalDstNodes) {
439 if (SrcNodeIds[i].Val1 == DstNodeIds[j].Val1) {
440 Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, j));
443 }
else if (SrcNodeIds[i].Val1 < DstNodeIds[j].Val1) {
444 Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, -1));
447 Nodes.
Add(
TIntTr(DstNodeIds[j].Val1, -1, j));
451 for (; i < TotalSrcNodes; i++) { Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, -1)); }
452 for (; j < TotalDstNodes; j++) { Nodes.
Add(
TIntTr(DstNodeIds[j].Val1, -1, j)); }
462 int Delta = (NumNodes+NumThreads-1)/NumThreads;
467 omp_set_num_threads(NumThreads);
468 #pragma omp parallel for schedule(static,Delta)
469 for (
int m = 0; m < NumNodes; m++) {
475 TInt Offset = SrcNodeIds[i].GetVal2();
476 TInt Sz = DstCol1.
Len()-Offset;
477 if (i < SrcNodeIds.
Len()-1) { Sz = SrcNodeIds[i+1].GetVal2()-Offset; }
482 TInt Offset = DstNodeIds[j].GetVal2();
483 TInt Sz = SrcCol2.
Len()-Offset;
484 if (j < DstNodeIds.
Len()-1) { Sz = DstNodeIds[j+1].GetVal2()-Offset; }
495 NumThreads = omp_get_max_threads();
496 Delta = (NumNodes+NumThreads-1)/(10*NumThreads);
497 omp_set_num_threads(NumThreads);
498 #pragma omp parallel for schedule(dynamic)
499 for (
int m = 0; m < NumNodes; m++) {
505 TInt Offset = SrcNodeIds[i].GetVal2();
506 TInt Sz = DstCol1.
Len()-Offset;
507 if (i < SrcNodeIds.
Len()-1) { Sz = SrcNodeIds[i+1].GetVal2()-Offset; }
512 TInt Offset = DstNodeIds[j].GetVal2();
513 TInt Sz = SrcCol2.
Len()-Offset;
514 if (j < DstNodeIds.
Len()-1) { Sz = DstNodeIds[j+1].GetVal2()-Offset; }
518 Graph->AddNodeWithEdges(n, InVV[m], OutVV[m]);
522 Graph->SetNodes(NumNodes);
531 template<
class PGraphMP>
534 int MaxThreads = omp_get_max_threads();
535 int Length, Threads, Delta, Nodes, Last;
536 uint64_t NumNodesEst;
537 TInt SrcColIdx, DstColIdx;
540 SrcColIdx = Table->GetColIdx(SrcCol);
541 DstColIdx = Table->GetColIdx(DstCol);
542 const TAttrType NodeType = Table->GetColType(SrcCol);
543 Assert(NodeType == Table->GetColType(DstCol));
547 int NumRows = Table->Next.Len();
549 int sz = NumRows / Load;
550 int *buckets = (
int *)malloc(sz *
sizeof(
int));
552 #pragma omp parallel for
553 for (
int i = 0; i < sz; i++)
556 if (NodeType ==
atInt) {
557 #pragma omp parallel for
558 for (
int i = 0; i < NumRows; i++) {
559 int vert = Table->IntCols[DstColIdx][i];
560 buckets[vert % sz] = 1;
563 else if (NodeType ==
atStr ) {
564 #pragma omp parallel for
565 for (
int i = 0; i < NumRows; i++) {
566 int vert = (Table->StrColMaps)[DstColIdx][i];
567 buckets[vert % sz] = 1;
571 #pragma omp parallel for reduction(+:cnt)
572 for (
int i = 0; i < sz; i++) {
577 NumNodesEst = sz * log ((
double)sz / cnt);
585 Length = Graph->Reserved();
586 Threads = MaxThreads/2;
587 Delta = (Length + Threads - 1) / Threads;
595 omp_set_num_threads(Threads);
596 #pragma omp parallel for schedule(static, Delta)
597 for (
int CurrRowIdx = 0; CurrRowIdx < Last; CurrRowIdx++) {
598 if ((uint64_t) Nodes + 1000 >= NumNodesEst) {
604 if (NodeType ==
atInt) {
605 SVal = Table->IntCols[SrcColIdx][CurrRowIdx];
606 DVal = Table->IntCols[DstColIdx][CurrRowIdx];
608 else if (NodeType ==
atStr ) {
609 SVal = (Table->StrColMaps)[SrcColIdx][CurrRowIdx];
610 DVal = (Table->StrColMaps)[DstColIdx][CurrRowIdx];
613 if (!Graph->AddOutEdge1(SrcIdx, SVal, DVal)) {
619 __sync_fetch_and_add(&OutVec[SrcIdx].Val, 1);
622 if (!Graph->AddInEdge1(DstIdx, SVal, DVal)) {
628 __sync_fetch_and_add(&InVec[DstIdx].Val, 1);
631 if ((uint64_t) Nodes + 1000 >= NumNodesEst) {
643 Graph->SetNodes(Nodes);
646 for (
int i = 0; i < Length; i++) {
647 Edges += OutVec[i] + InVec[i];
650 for (
int Idx = 0; Idx < Length; Idx++) {
651 if (OutVec[Idx] > 0 || InVec[Idx] > 0) {
652 Graph->ReserveNodeDegs(Idx, InVec[Idx], OutVec[Idx]);
657 Length = Graph->Reserved();
658 Threads = MaxThreads;
659 Delta = (Length + Threads - 1) / Threads;
661 omp_set_num_threads(Threads);
662 #pragma omp parallel for schedule(static,Delta)
663 for (
int CurrRowIdx = 0; CurrRowIdx < Last; CurrRowIdx++) {
665 if (NodeType ==
atInt) {
666 SVal = Table->IntCols[SrcColIdx][CurrRowIdx];
667 DVal = Table->IntCols[DstColIdx][CurrRowIdx];
669 else if (NodeType ==
atStr) {
670 SVal = (Table->StrColMaps)[SrcColIdx][CurrRowIdx];
671 DVal = (Table->StrColMaps)[DstColIdx][CurrRowIdx];
674 Graph->AddOutEdge2(SVal, DVal);
675 Graph->AddInEdge2(SVal, DVal);
679 Length = Graph->Reserved();
680 Threads = MaxThreads*2;
681 Delta = (Length + Threads - 1) / Threads;
683 omp_set_num_threads(Threads);
684 #pragma omp parallel for schedule(dynamic)
685 for (
int Idx = 0; Idx < Length; Idx++) {
686 if (OutVec[Idx] > 0 || InVec[Idx] > 0) {
687 Graph->SortEdges(Idx, InVec[Idx], OutVec[Idx]);
695 template<
class PGraphMP>
697 const TStr& SrcCol,
const TStr& DstCol,
703 const TInt SrcColIdx = Table->GetColIdx(SrcCol);
704 const TInt DstColIdx = Table->GetColIdx(DstCol);
705 const TInt NumRows = Table->GetNumValidRows();
707 const TAttrType NodeType = Table->GetColType(SrcCol);
708 Assert(NodeType == Table->GetColType(DstCol));
711 TIntV SrcCol1, EdgeCol1, EdgeCol2, DstCol2;
717 #pragma omp parallel sections num_threads(4)
720 { SrcCol1.Reserve(NumRows, NumRows); }
722 { EdgeCol1.Reserve(NumRows, NumRows); }
724 { DstCol2.Reserve(NumRows, NumRows); }
726 { EdgeCol2.Reserve(NumRows, NumRows); }
732 Table->GetPartitionRanges(Partitions, omp_get_max_threads());
733 TInt PartitionSize = Partitions[0].GetVal2()-Partitions[0].GetVal1()+1;
738 omp_set_num_threads(omp_get_max_threads());
739 if (NodeType ==
atInt) {
740 #pragma omp parallel for schedule(static)
741 for (
int i = 0; i < Partitions.
Len(); i++) {
744 while (RowI < EndI) {
747 EdgeCol1[RowId] = RowId;
749 EdgeCol2[RowId] = RowId;
754 else if (NodeType ==
atStr) {
755 #pragma omp parallel for schedule(static)
756 for (
int i = 0; i < Partitions.
Len(); i++) {
759 while (RowI < EndI) {
762 EdgeCol1[RowId] = RowId;
764 EdgeCol2[RowId] = RowId;
772 omp_set_num_threads(omp_get_max_threads());
775 #pragma omp single nowait
778 #pragma omp task untied shared(SrcCol1, EdgeCol1)
782 #pragma omp single nowait
785 #pragma omp task untied shared(EdgeCol2, DstCol2)
796 TInt NumThreads = omp_get_max_threads();
797 TInt PartSize = (NumRows/NumThreads);
801 TIntV SrcOffsets, DstOffsets;
803 for (
TInt i = 1; i < NumThreads; i++) {
804 TInt CurrOffset = i * PartSize;
805 while (CurrOffset < (i+1) * PartSize &&
806 SrcCol1[CurrOffset-1] == SrcCol1[CurrOffset]) {
810 if (CurrOffset < (i+1) * PartSize) { SrcOffsets.
Add(CurrOffset); }
812 SrcOffsets.
Add(NumRows);
815 for (
TInt i = 1; i < NumThreads; i++) {
816 TInt CurrOffset = i * PartSize;
817 while (CurrOffset < (i+1) * PartSize &&
818 DstCol2[CurrOffset-1] == DstCol2[CurrOffset]) {
822 if (CurrOffset < (i+1) * PartSize) { DstOffsets.
Add(CurrOffset); }
824 DstOffsets.
Add(NumRows);
826 TInt SrcPartCnt = SrcOffsets.
Len()-1;
827 TInt DstPartCnt = DstOffsets.
Len()-1;
830 TIntV SrcNodeCounts, DstNodeCounts;
831 SrcNodeCounts.
Reserve(SrcPartCnt, SrcPartCnt);
832 DstNodeCounts.
Reserve(DstPartCnt, DstPartCnt);
834 #pragma omp parallel for schedule(dynamic)
835 for (
int t = 0; t < SrcPartCnt+DstPartCnt; t++) {
836 if (t < SrcPartCnt) {
838 if (SrcOffsets[i] != SrcOffsets[i+1]) {
839 SrcNodeCounts[i] = 1;
840 TInt CurrNode = SrcCol1[SrcOffsets[i]];
841 for (
TInt j = SrcOffsets[i]+1; j < SrcOffsets[i+1]; j++) {
842 while (j < SrcOffsets[i+1] && SrcCol1[j] == CurrNode) { j++; }
843 if (j < SrcOffsets[i+1]) {
845 CurrNode = SrcCol1[j];
850 TInt i = t - SrcPartCnt;
851 if (DstOffsets[i] != DstOffsets[i+1]) {
852 DstNodeCounts[i] = 1;
853 TInt CurrNode = DstCol2[DstOffsets[i]];
854 for (
TInt j = DstOffsets[i]+1; j < DstOffsets[i+1]; j++) {
855 while (j < DstOffsets[i+1] && DstCol2[j] == CurrNode) { j++; }
856 if (j < DstOffsets[i+1]) {
858 CurrNode = DstCol2[j];
865 TInt TotalSrcNodes = 0;
867 for (
int i = 0; i < SrcPartCnt; i++) {
868 SrcIdOffsets.
Add(TotalSrcNodes);
869 TotalSrcNodes += SrcNodeCounts[i];
872 TInt TotalDstNodes = 0;
874 for (
int i = 0; i < DstPartCnt; i++) {
875 DstIdOffsets.
Add(TotalDstNodes);
876 TotalDstNodes += DstNodeCounts[i];
882 TIntPrV SrcNodeIds, DstNodeIds;
883 #pragma omp parallel sections
886 { SrcNodeIds.
Reserve(TotalSrcNodes, TotalSrcNodes); }
888 { DstNodeIds.
Reserve(TotalDstNodes, TotalDstNodes); }
892 #pragma omp parallel for schedule(dynamic)
893 for (
int t = 0; t < SrcPartCnt+DstPartCnt; t++) {
894 if (t < SrcPartCnt) {
896 if (SrcOffsets[i] != SrcOffsets[i+1]) {
897 TInt CurrNode = SrcCol1[SrcOffsets[i]];
898 TInt ThreadOffset = SrcIdOffsets[i];
899 SrcNodeIds[ThreadOffset] =
TIntPr(CurrNode, SrcOffsets[i]);
901 for (
TInt j = SrcOffsets[i]+1; j < SrcOffsets[i+1]; j++) {
902 while (j < SrcOffsets[i+1] && SrcCol1[j] == CurrNode) { j++; }
903 if (j < SrcOffsets[i+1]) {
904 CurrNode = SrcCol1[j];
905 SrcNodeIds[ThreadOffset+CurrCount] =
TIntPr(CurrNode, j);
911 TInt i = t - SrcPartCnt;
912 if (DstOffsets[i] != DstOffsets[i+1]) {
913 TInt CurrNode = DstCol2[DstOffsets[i]];
914 TInt ThreadOffset = DstIdOffsets[i];
915 DstNodeIds[ThreadOffset] =
TIntPr(CurrNode, DstOffsets[i]);
917 for (
TInt j = DstOffsets[i]+1; j < DstOffsets[i+1]; j++) {
918 while (j < DstOffsets[i+1] && DstCol2[j] == CurrNode) { j++; }
919 if (j < DstOffsets[i+1]) {
920 CurrNode = DstCol2[j];
921 DstNodeIds[ThreadOffset+CurrCount] =
TIntPr(CurrNode, j);
933 Nodes.
Reserve(TotalSrcNodes+TotalDstNodes);
936 while (i < TotalSrcNodes && j < TotalDstNodes) {
937 if (SrcNodeIds[i].Val1 == DstNodeIds[j].Val1) {
938 Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, j));
941 }
else if (SrcNodeIds[i].Val1 < DstNodeIds[j].Val1) {
942 Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, -1));
945 Nodes.
Add(
TIntTr(DstNodeIds[j].Val1, -1, j));
949 for (; i < TotalSrcNodes; i++) { Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, -1)); }
950 for (; j < TotalDstNodes; j++) { Nodes.
Add(
TIntTr(DstNodeIds[j].Val1, -1, j)); }
955 PGraphMP Graph = PGraphMP::TObj::New(NumNodes, NumRows);
963 #pragma omp parallel for schedule(static,100)
964 for (
int m = 0; m < NumNodes; m++) {
970 TInt Offset = SrcNodeIds[i].GetVal2();
971 TInt Sz = EdgeCol1.Len()-Offset;
972 if (i < SrcNodeIds.
Len()-1) { Sz = SrcNodeIds[i+1].GetVal2()-Offset; }
977 TInt Offset = DstNodeIds[j].GetVal2();
978 TInt Sz = EdgeCol2.Len()-Offset;
979 if (j < DstNodeIds.
Len()-1) { Sz = DstNodeIds[j+1].GetVal2()-Offset; }
983 Graph->AddNodeWithEdges(n, InVV[m], OutVV[m]);
985 Graph->SetNodes(NumNodes);
989 omp_set_num_threads(omp_get_max_threads());
990 if (NodeType ==
atInt) {
991 #pragma omp parallel for schedule(static)
992 for (
int i = 0; i < Partitions.
Len(); i++) {
995 while (RowI < EndI) {
999 Graph->AddEdgeUnchecked(RowId, SrcId, DstId);
1001 for (
TInt ea_i = 0; ea_i < EdgeAttrV.
Len(); ea_i++) {
1002 TStr ColName = EdgeAttrV[ea_i];
1003 TAttrType T = Table->GetColType(ColName);
1004 TInt Index = Table->GetColIdx(ColName);
1007 Graph->AddIntAttrDatE(RowId, Table->IntCols[Index][RowId], ColName);
1010 Graph->AddFltAttrDatE(RowId, Table->FltCols[Index][RowId], ColName);
1013 Graph->AddStrAttrDatE(RowId, Table->GetStrValIdx(Index, RowId), ColName);
1017 if ((Table->SrcNodeAttrV).Len() > 0) {
1018 Table->AddNodeAttributes(SrcId, Table->SrcNodeAttrV, RowId, NodeIntAttrs, NodeFltAttrs, NodeStrAttrs);
1021 if ((Table->DstNodeAttrV).Len() > 0) {
1022 Table->AddNodeAttributes(SrcId, Table->DstNodeAttrV, RowId, NodeIntAttrs, NodeFltAttrs, NodeStrAttrs);
1027 else if (NodeType ==
atStr) {
1028 #pragma omp parallel for schedule(static)
1029 for (
int i = 0; i < Partitions.
Len(); i++) {
1032 while (RowI < EndI) {
1036 Graph->AddEdgeUnchecked(RowId, SrcId, DstId);
1038 for (
TInt ea_i = 0; ea_i < EdgeAttrV.
Len(); ea_i++) {
1039 TStr ColName = EdgeAttrV[ea_i];
1040 TAttrType T = Table->GetColType(ColName);
1041 TInt Index = Table->GetColIdx(ColName);
1044 Graph->AddIntAttrDatE(RowId, Table->IntCols[Index][RowId], ColName);
1047 Graph->AddFltAttrDatE(RowId, Table->FltCols[Index][RowId], ColName);
1050 Graph->AddStrAttrDatE(RowId, Table->GetStrValIdx(Index, RowId), ColName);
1054 if ((Table->SrcNodeAttrV).Len() > 0) {
1055 Table->AddNodeAttributes(SrcId, Table->SrcNodeAttrV, RowId, NodeIntAttrs, NodeFltAttrs, NodeStrAttrs);
1058 if ((Table->DstNodeAttrV).Len() > 0) {
1059 Table->AddNodeAttributes(SrcId, Table->DstNodeAttrV, RowId, NodeIntAttrs, NodeFltAttrs, NodeStrAttrs);
1068 if ((Table->SrcNodeAttrV).Len() > 0 || (Table->DstNodeAttrV).Len() > 0) {
1069 for (
typename PGraphMP::TObj::TNodeI NodeI = Graph->BegNI(); NodeI < Graph->EndNI(); NodeI++) {
1070 TInt NId = NodeI.GetId();
1071 if (NodeIntAttrs.
IsKey(NId)) {
1074 TInt AttrVal = Table->AggregateVector<
TInt>(it.GetDat(), AggrPolicy);
1075 Graph->AddIntAttrDatN(NId, AttrVal, it.GetKey());
1078 if (NodeFltAttrs.
IsKey(NId)) {
1081 TFlt AttrVal = Table->AggregateVector<
TFlt>(it.GetDat(), AggrPolicy);
1082 Graph->AddFltAttrDatN(NId, AttrVal, it.GetKey());
1085 if (NodeStrAttrs.
IsKey(NId)) {
1088 TStr AttrVal = Table->AggregateVector<
TStr>(it.GetDat(), AggrPolicy);
1089 Graph->AddStrAttrDatN(NId, AttrVal, it.GetKey());
1096 Graph->SetEdges(NumRows);
1106 template<
class PGraphMP>
1111 return ToNetworkMP<PGraphMP>(Table, SrcCol, DstCol, V,AggrPolicy);
1117 template<
class PGraphMP>
1119 const TStr& SrcCol,
const TStr& DstCol,
1125 const TInt SrcColIdx = Table->GetColIdx(SrcCol);
1126 const TInt DstColIdx = Table->GetColIdx(DstCol);
1127 const TInt NumRows = Table->NumValidRows;
1129 const TAttrType NodeType = Table->GetColType(SrcCol);
1130 Assert(NodeType == Table->GetColType(DstCol));
1134 TIntV SrcCol1, EdgeCol1, EdgeCol2, DstCol2;
1136 #pragma omp parallel sections num_threads(4)
1139 { SrcCol1.
Reserve(NumRows, NumRows); }
1141 { EdgeCol1.Reserve(NumRows, NumRows); }
1143 { DstCol2.Reserve(NumRows, NumRows); }
1145 { EdgeCol2.Reserve(NumRows, NumRows); }
1151 const int NThreads = 40;
1152 Table->GetPartitionRanges(Partitions, NThreads);
1153 TInt PartitionSize = Partitions[0].GetVal2()-Partitions[0].GetVal1()+1;
1158 if (NodeType ==
atInt) {
1159 #pragma omp parallel for schedule(static)
1160 for (
int i = 0; i < Partitions.
Len(); i++) {
1163 while (RowI < EndI) {
1166 EdgeCol1[RowId] = RowId;
1168 EdgeCol2[RowId] = RowId;
1173 else if (NodeType ==
atStr) {
1174 #pragma omp parallel for schedule(static)
1175 for (
int i = 0; i < Partitions.
Len(); i++) {
1178 while (RowI < EndI) {
1181 EdgeCol1[RowId] = RowId;
1183 EdgeCol2[RowId] = RowId;
1195 int Parts[NThreads+1];
1196 for (
int i = 0; i < NThreads; i++) {
1197 Parts[i] = NumRows.
Val / NThreads * i;
1199 Parts[NThreads] = NumRows;
1206 TInt ExtremePoints[4][NThreads];
1207 omp_set_num_threads(omp_get_max_threads());
1208 #pragma omp parallel
1210 #pragma omp for schedule(static) nowait
1211 for (
int i = 0; i < NThreads; i++) {
1212 TInt StartPos = Parts[i];
1213 TInt EndPos = Parts[i+1]-1;
1216 ExtremePoints[0][i] = SrcCol1[StartPos];
1217 ExtremePoints[2][i] = SrcCol1[EndPos];
1219 #pragma omp for schedule(static) nowait
1220 for (
int i = 0; i < NThreads; i++) {
1221 TInt StartPos = Parts[i];
1222 TInt EndPos = Parts[i+1]-1;
1225 ExtremePoints[1][i] = DstCol2[StartPos];
1226 ExtremePoints[3][i] = DstCol2[EndPos];
1234 TInt MinId(INT_MAX);
1235 for (
int j = 0; j < 2; j++) {
1236 for (
int i = 0; i < NThreads; i++) {
1237 if (MinId > ExtremePoints[j][i]) { MinId = ExtremePoints[j][i]; }
1241 for (
int j = 2; j < 4; j++) {
1242 for (
int i = 0; i < NThreads; i++) {
1243 if (MaxId < ExtremePoints[j][i]) { MaxId = ExtremePoints[j][i]; }
1252 const int NumCollectors = 20;
1253 int Range = MaxId.
Val - MinId.
Val;
1254 TIntV IdRanges(NumCollectors+1);
1255 for (
int j = 0; j < NumCollectors; j++) {
1256 IdRanges[j] = MinId + Range/NumCollectors*j;
1258 IdRanges[NumCollectors] = MaxId+1;
1263 int SrcOffsets[NThreads][NumCollectors+1];
1264 #pragma omp parallel for schedule(static)
1265 for (
int i = 0; i < NThreads; i++) {
1266 int CollectorId = 0;
1267 for (
int j = Parts[i]; j < Parts[i+1]; j++) {
1268 while (SrcCol1[j] >= IdRanges[CollectorId]) {
1269 SrcOffsets[i][CollectorId++] = j;
1272 while (CollectorId <= NumCollectors) {
1273 SrcOffsets[i][CollectorId++] = Parts[i+1];
1276 int DstOffsets[NThreads][NumCollectors+1];
1277 #pragma omp parallel for schedule(static)
1278 for (
int i = 0; i < NThreads; i++) {
1279 int CollectorId = 0;
1280 for (
int j = Parts[i]; j < Parts[i+1]; j++) {
1281 while (DstCol2[j] >= IdRanges[CollectorId]) {
1282 DstOffsets[i][CollectorId++] = j;
1285 while (CollectorId <= NumCollectors) {
1286 DstOffsets[i][CollectorId++] = Parts[i+1];
1300 TIntV SrcCollectorOffsets(NumCollectors+1);
1301 SrcCollectorOffsets[0] = 0;
1302 for (
int k = 0; k < NumCollectors; k++) {
1304 for (
int i = 0; i < NThreads; i++) {
1305 SumOffset += SrcOffsets[i][k+1] - SrcOffsets[i][k];
1307 SrcCollectorOffsets[k+1] = SrcCollectorOffsets[k] + SumOffset;
1309 TIntV DstCollectorOffsets(NumCollectors+1);
1310 DstCollectorOffsets[0] = 0;
1311 for (
int k = 0; k < NumCollectors; k++) {
1313 for (
int i = 0; i < NThreads; i++) {
1314 SumOffset += DstOffsets[i][k+1] - DstOffsets[i][k];
1316 DstCollectorOffsets[k+1] = DstCollectorOffsets[k] + SumOffset;
1325 TIntV SrcCol3, EdgeCol3, EdgeCol4, DstCol4;
1326 #pragma omp parallel sections num_threads(4)
1329 { SrcCol3.
Reserve(NumRows, NumRows); }
1331 { EdgeCol3.
Reserve(NumRows, NumRows); }
1333 { DstCol4.
Reserve(NumRows, NumRows); }
1335 { EdgeCol4.
Reserve(NumRows, NumRows); }
1338 TIntV SrcNodeCounts(NumCollectors), DstNodeCounts(NumCollectors);
1339 #pragma omp parallel for schedule(static)
1340 for (
int k = 0; k < NumCollectors; k++) {
1341 int ind = SrcCollectorOffsets[k];
1342 for (
int i = 0; i < NThreads; i++) {
1343 for (
int j = SrcOffsets[i][k]; j < SrcOffsets[i][k+1]; j++) {
1344 SrcCol3[ind] = SrcCol1[j];
1345 EdgeCol3[ind] = EdgeCol1[j];
1349 TTable::QSortKeyVal(SrcCol3, EdgeCol3, SrcCollectorOffsets[k], SrcCollectorOffsets[k+1]-1);
1351 if (SrcCollectorOffsets[k+1] > SrcCollectorOffsets[k]) {
1353 for (
int j = SrcCollectorOffsets[k]+1; j < SrcCollectorOffsets[k+1]; j++) {
1354 if (SrcCol3[j] != SrcCol3[j-1]) { SrcCount++; }
1357 SrcNodeCounts[k] = SrcCount;
1359 ind = DstCollectorOffsets[k];
1360 for (
int i = 0; i < NThreads; i++) {
1361 for (
int j = DstOffsets[i][k]; j < DstOffsets[i][k+1]; j++) {
1362 DstCol4[ind] = DstCol2[j];
1363 EdgeCol4[ind] = EdgeCol2[j];
1367 TTable::QSortKeyVal(DstCol4, EdgeCol4, DstCollectorOffsets[k], DstCollectorOffsets[k+1]-1);
1369 if (DstCollectorOffsets[k+1] > DstCollectorOffsets[k]) {
1371 for (
int j = DstCollectorOffsets[k]+1; j < DstCollectorOffsets[k+1]; j++) {
1372 if (DstCol4[j] != DstCol4[j-1]) { DstCount++; }
1375 DstNodeCounts[k] = DstCount;
1378 TInt TotalSrcNodes = 0;
1380 for (
int i = 0; i < NumCollectors; i++) {
1381 SrcIdOffsets.
Add(TotalSrcNodes);
1382 TotalSrcNodes += SrcNodeCounts[i];
1393 TInt TotalDstNodes = 0;
1395 for (
int i = 0; i < NumCollectors; i++) {
1396 DstIdOffsets.
Add(TotalDstNodes);
1397 TotalDstNodes += DstNodeCounts[i];
1401 TIntPrV SrcNodeIds, DstNodeIds;
1402 #pragma omp parallel sections
1405 { SrcNodeIds.
Reserve(TotalSrcNodes, TotalSrcNodes); }
1407 { DstNodeIds.
Reserve(TotalDstNodes, TotalDstNodes); }
1411 #pragma omp parallel for schedule(dynamic)
1412 for (
int t = 0; t < 2*NumCollectors; t++) {
1413 if (t < NumCollectors) {
1415 if (SrcCollectorOffsets[i] < SrcCollectorOffsets[i+1]) {
1416 TInt CurrNode = SrcCol3[SrcCollectorOffsets[i]];
1417 TInt ThreadOffset = SrcIdOffsets[i];
1418 SrcNodeIds[ThreadOffset] =
TIntPr(CurrNode, SrcCollectorOffsets[i]);
1420 for (
TInt j = SrcCollectorOffsets[i]+1; j < SrcCollectorOffsets[i+1]; j++) {
1421 while (j < SrcCollectorOffsets[i+1] && SrcCol3[j] == CurrNode) { j++; }
1422 if (j < SrcCollectorOffsets[i+1]) {
1423 CurrNode = SrcCol3[j];
1424 SrcNodeIds[ThreadOffset+CurrCount] =
TIntPr(CurrNode, j);
1430 TInt i = t - NumCollectors;
1431 if (DstCollectorOffsets[i] < DstCollectorOffsets[i+1]) {
1432 TInt CurrNode = DstCol4[DstCollectorOffsets[i]];
1433 TInt ThreadOffset = DstIdOffsets[i];
1434 DstNodeIds[ThreadOffset] =
TIntPr(CurrNode, DstCollectorOffsets[i]);
1436 for (
TInt j = DstCollectorOffsets[i]+1; j < DstCollectorOffsets[i+1]; j++) {
1437 while (j < DstCollectorOffsets[i+1] && DstCol4[j] == CurrNode) { j++; }
1438 if (j < DstCollectorOffsets[i+1]) {
1439 CurrNode = DstCol4[j];
1440 DstNodeIds[ThreadOffset+CurrCount] =
TIntPr(CurrNode, j);
1452 Nodes.
Reserve(TotalSrcNodes+TotalDstNodes);
1455 while (i < TotalSrcNodes && j < TotalDstNodes) {
1456 if (SrcNodeIds[i].Val1 == DstNodeIds[j].Val1) {
1457 Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, j));
1460 }
else if (SrcNodeIds[i].Val1 < DstNodeIds[j].Val1) {
1461 Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, -1));
1464 Nodes.
Add(
TIntTr(DstNodeIds[j].Val1, -1, j));
1468 for (; i < TotalSrcNodes; i++) { Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, -1)); }
1469 for (; j < TotalDstNodes; j++) { Nodes.
Add(
TIntTr(DstNodeIds[j].Val1, -1, j)); }
1474 PGraphMP Graph = PGraphMP::TObj::New(NumNodes, NumRows);
1482 #pragma omp parallel for schedule(static,100)
1483 for (
int m = 0; m < NumNodes; m++) {
1487 Nodes[m].
GetVal(n, i, j);
1489 TInt Offset = SrcNodeIds[i].GetVal2();
1490 TInt Sz = EdgeCol3.
Len()-Offset;
1491 if (i < SrcNodeIds.
Len()-1) { Sz = SrcNodeIds[i+1].GetVal2()-Offset; }
1496 TInt Offset = DstNodeIds[j].GetVal2();
1497 TInt Sz = EdgeCol4.
Len()-Offset;
1498 if (j < DstNodeIds.
Len()-1) { Sz = DstNodeIds[j+1].GetVal2()-Offset; }
1502 Graph->AddNodeWithEdges(n, InVV[m], OutVV[m]);
1504 Graph->SetNodes(NumNodes);
1508 omp_set_num_threads(omp_get_max_threads());
1509 if (NodeType ==
atInt) {
1510 #pragma omp parallel for schedule(static)
1511 for (
int i = 0; i < Partitions.
Len(); i++) {
1514 while (RowI < EndI) {
1518 Graph->AddEdgeUnchecked(RowId, SrcId, DstId);
1523 else if (NodeType ==
atStr) {
1524 #pragma omp parallel for schedule(static)
1525 for (
int i = 0; i < Partitions.
Len(); i++) {
1528 while (RowI < EndI) {
1532 Graph->AddEdgeUnchecked(RowId, SrcId, DstId);
1537 Graph->SetEdges(NumRows);
1546 template<
class PGraphMP>
1551 return ToNetworkMP2<PGraphMP>(Table, SrcCol, DstCol, V, V, V, AggrPolicy);
1553 #endif // GCC_ATOMIC
1571 template<
class PGraph>
1573 const TStr& SrcCol,
const TStr& DstCol,
1576 PGraph Graph = PGraph::TObj::New();
1578 const TAttrType NodeType = Table->GetColType(SrcCol);
1579 Assert(NodeType == Table->GetColType(DstCol));
1580 const TInt SrcColIdx = Table->GetColIdx(SrcCol);
1581 const TInt DstColIdx = Table->GetColIdx(DstCol);
1592 for (
int CurrRowIdx = 0; CurrRowIdx < (Table->Next).Len(); CurrRowIdx++) {
1593 if ((Table->Next)[CurrRowIdx] == Table->Invalid) {
1599 if (NodeType ==
atFlt) {
1600 TFlt FSVal = (Table->FltCols)[SrcColIdx][CurrRowIdx];
1601 SVal = Table->CheckAndAddFltNode(Graph, FltNodeVals, FSVal);
1602 TFlt FDVal = (Table->FltCols)[SrcColIdx][CurrRowIdx];
1603 DVal = Table->CheckAndAddFltNode(Graph, FltNodeVals, FDVal);
1605 else if (NodeType ==
atInt || NodeType ==
atStr) {
1606 if (NodeType ==
atInt) {
1607 SVal = (Table->IntCols)[SrcColIdx][CurrRowIdx];
1608 DVal = (Table->IntCols)[DstColIdx][CurrRowIdx];
1611 SVal = (Table->StrColMaps)[SrcColIdx][CurrRowIdx];
1613 DVal = (Table->StrColMaps)[DstColIdx][CurrRowIdx];
1616 if (!Graph->IsNode(SVal)) {Graph->AddNode(SVal); }
1617 if (!Graph->IsNode(DVal)) {Graph->AddNode(DVal); }
1623 Graph->AddEdge(SVal, DVal, CurrRowIdx);
1626 for (
TInt i = 0; i < EdgeAttrV.
Len(); i++) {
1627 TStr ColName = EdgeAttrV[i];
1628 TAttrType T = Table->GetColType(ColName);
1629 TInt Index = Table->GetColIdx(ColName);
1632 Graph->AddIntAttrDatE(CurrRowIdx, Table->IntCols[Index][CurrRowIdx], ColName);
1635 Graph->AddFltAttrDatE(CurrRowIdx, Table->FltCols[Index][CurrRowIdx], ColName);
1638 Graph->AddStrAttrDatE(CurrRowIdx, Table->GetStrValIdx(Index, CurrRowIdx), ColName);
1650 template<
class PGraphMP>
1652 const TStr& SrcCol,
const TStr& DstCol,
1658 const TInt SrcColIdx = Table->GetColIdx(SrcCol);
1659 const TInt DstColIdx = Table->GetColIdx(DstCol);
1660 const TInt NumRows = Table->GetNumValidRows();
1662 const TAttrType NodeType = Table->GetColType(SrcCol);
1663 Assert(NodeType == Table->GetColType(DstCol));
1665 TIntV SrcCol1, EdgeCol1, EdgeCol2, DstCol2;
1671 #pragma omp parallel sections num_threads(4)
1674 { SrcCol1.Reserve(NumRows, NumRows); }
1676 { EdgeCol1.Reserve(NumRows, NumRows); }
1678 { DstCol2.Reserve(NumRows, NumRows); }
1680 { EdgeCol2.Reserve(NumRows, NumRows); }
1686 Table->GetPartitionRanges(Partitions, omp_get_max_threads());
1687 TInt PartitionSize = Partitions[0].GetVal2()-Partitions[0].GetVal1()+1;
1693 omp_set_num_threads(omp_get_max_threads());
1694 if (NodeType ==
atInt) {
1695 #pragma omp parallel for schedule(static)
1696 for (
int i = 0; i < Partitions.
Len(); i++) {
1699 while (RowI < EndI) {
1702 EdgeCol1[RowId] = RowId;
1704 EdgeCol2[RowId] = RowId;
1709 else if (NodeType ==
atStr) {
1710 #pragma omp parallel for schedule(static)
1711 for (
int i = 0; i < Partitions.
Len(); i++) {
1714 while (RowI < EndI) {
1717 EdgeCol1[RowId] = RowId;
1719 EdgeCol2[RowId] = RowId;
1727 omp_set_num_threads(omp_get_max_threads());
1728 #pragma omp parallel
1730 #pragma omp single nowait
1733 #pragma omp task untied shared(SrcCol1, EdgeCol1)
1737 #pragma omp single nowait
1740 #pragma omp task untied shared(EdgeCol2, DstCol2)
1745 #pragma omp taskwait
1751 TInt NumThreads = omp_get_max_threads();
1752 TInt PartSize = (NumRows/NumThreads);
1756 TIntV SrcOffsets, DstOffsets;
1758 for (
TInt i = 1; i < NumThreads; i++) {
1759 TInt CurrOffset = i * PartSize;
1760 while (CurrOffset < (i+1) * PartSize &&
1761 SrcCol1[CurrOffset-1] == SrcCol1[CurrOffset]) {
1765 if (CurrOffset < (i+1) * PartSize) { SrcOffsets.
Add(CurrOffset); }
1767 SrcOffsets.
Add(NumRows);
1770 for (
TInt i = 1; i < NumThreads; i++) {
1771 TInt CurrOffset = i * PartSize;
1772 while (CurrOffset < (i+1) * PartSize &&
1773 DstCol2[CurrOffset-1] == DstCol2[CurrOffset]) {
1777 if (CurrOffset < (i+1) * PartSize) { DstOffsets.
Add(CurrOffset); }
1779 DstOffsets.
Add(NumRows);
1781 TInt SrcPartCnt = SrcOffsets.
Len()-1;
1782 TInt DstPartCnt = DstOffsets.
Len()-1;
1785 TIntV SrcNodeCounts, DstNodeCounts;
1786 SrcNodeCounts.
Reserve(SrcPartCnt, SrcPartCnt);
1787 DstNodeCounts.
Reserve(DstPartCnt, DstPartCnt);
1789 #pragma omp parallel for schedule(dynamic)
1790 for (
int t = 0; t < SrcPartCnt+DstPartCnt; t++) {
1791 if (t < SrcPartCnt) {
1793 if (SrcOffsets[i] != SrcOffsets[i+1]) {
1794 SrcNodeCounts[i] = 1;
1795 TInt CurrNode = SrcCol1[SrcOffsets[i]];
1796 for (
TInt j = SrcOffsets[i]+1; j < SrcOffsets[i+1]; j++) {
1797 while (j < SrcOffsets[i+1] && SrcCol1[j] == CurrNode) { j++; }
1798 if (j < SrcOffsets[i+1]) {
1800 CurrNode = SrcCol1[j];
1805 TInt i = t - SrcPartCnt;
1806 if (DstOffsets[i] != DstOffsets[i+1]) {
1807 DstNodeCounts[i] = 1;
1808 TInt CurrNode = DstCol2[DstOffsets[i]];
1809 for (
TInt j = DstOffsets[i]+1; j < DstOffsets[i+1]; j++) {
1810 while (j < DstOffsets[i+1] && DstCol2[j] == CurrNode) { j++; }
1811 if (j < DstOffsets[i+1]) {
1813 CurrNode = DstCol2[j];
1820 TInt TotalSrcNodes = 0;
1822 for (
int i = 0; i < SrcPartCnt; i++) {
1823 SrcIdOffsets.
Add(TotalSrcNodes);
1824 TotalSrcNodes += SrcNodeCounts[i];
1827 TInt TotalDstNodes = 0;
1829 for (
int i = 0; i < DstPartCnt; i++) {
1830 DstIdOffsets.
Add(TotalDstNodes);
1831 TotalDstNodes += DstNodeCounts[i];
1837 TIntPrV SrcNodeIds, DstNodeIds;
1838 #pragma omp parallel sections
1841 { SrcNodeIds.
Reserve(TotalSrcNodes, TotalSrcNodes); }
1843 { DstNodeIds.
Reserve(TotalDstNodes, TotalDstNodes); }
1847 #pragma omp parallel for schedule(dynamic)
1848 for (
int t = 0; t < SrcPartCnt+DstPartCnt; t++) {
1849 if (t < SrcPartCnt) {
1851 if (SrcOffsets[i] != SrcOffsets[i+1]) {
1852 TInt CurrNode = SrcCol1[SrcOffsets[i]];
1853 TInt ThreadOffset = SrcIdOffsets[i];
1854 SrcNodeIds[ThreadOffset] =
TIntPr(CurrNode, SrcOffsets[i]);
1856 for (
TInt j = SrcOffsets[i]+1; j < SrcOffsets[i+1]; j++) {
1857 while (j < SrcOffsets[i+1] && SrcCol1[j] == CurrNode) { j++; }
1858 if (j < SrcOffsets[i+1]) {
1859 CurrNode = SrcCol1[j];
1860 SrcNodeIds[ThreadOffset+CurrCount] =
TIntPr(CurrNode, j);
1866 TInt i = t - SrcPartCnt;
1867 if (DstOffsets[i] != DstOffsets[i+1]) {
1868 TInt CurrNode = DstCol2[DstOffsets[i]];
1869 TInt ThreadOffset = DstIdOffsets[i];
1870 DstNodeIds[ThreadOffset] =
TIntPr(CurrNode, DstOffsets[i]);
1872 for (
TInt j = DstOffsets[i]+1; j < DstOffsets[i+1]; j++) {
1873 while (j < DstOffsets[i+1] && DstCol2[j] == CurrNode) { j++; }
1874 if (j < DstOffsets[i+1]) {
1875 CurrNode = DstCol2[j];
1876 DstNodeIds[ThreadOffset+CurrCount] =
TIntPr(CurrNode, j);
1888 Nodes.
Reserve(TotalSrcNodes+TotalDstNodes);
1891 while (i < TotalSrcNodes && j < TotalDstNodes) {
1892 if (SrcNodeIds[i].Val1 == DstNodeIds[j].Val1) {
1893 Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, j));
1896 }
else if (SrcNodeIds[i].Val1 < DstNodeIds[j].Val1) {
1897 Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, -1));
1900 Nodes.
Add(
TIntTr(DstNodeIds[j].Val1, -1, j));
1904 for (; i < TotalSrcNodes; i++) { Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, -1)); }
1905 for (; j < TotalDstNodes; j++) { Nodes.
Add(
TIntTr(DstNodeIds[j].Val1, -1, j)); }
1910 PGraphMP Graph = PGraphMP::TObj::New(NumNodes, NumRows);
1918 #pragma omp parallel for schedule(static,100)
1919 for (
int m = 0; m < NumNodes; m++) {
1923 Nodes[m].
GetVal(n, i, j);
1925 TInt Offset = SrcNodeIds[i].GetVal2();
1926 TInt Sz = EdgeCol1.Len()-Offset;
1927 if (i < SrcNodeIds.
Len()-1) { Sz = SrcNodeIds[i+1].GetVal2()-Offset; }
1932 TInt Offset = DstNodeIds[j].GetVal2();
1933 TInt Sz = EdgeCol2.Len()-Offset;
1934 if (j < DstNodeIds.
Len()-1) { Sz = DstNodeIds[j+1].GetVal2()-Offset; }
1938 Graph->AddNodeWithEdges(n, InVV[m], OutVV[m]);
1940 Graph->SetNodes(NumNodes);
1944 omp_set_num_threads(omp_get_max_threads());
1945 if (NodeType ==
atInt) {
1946 #pragma omp parallel for schedule(static)
1947 for (
int i = 0; i < Partitions.
Len(); i++) {
1950 while (RowI < EndI) {
1954 Graph->AddEdgeUnchecked(RowId, SrcId, DstId);
1959 else if (NodeType ==
atStr) {
1960 #pragma omp parallel for schedule(static)
1961 for (
int i = 0; i < Partitions.
Len(); i++) {
1964 while (RowI < EndI) {
1968 Graph->AddEdgeUnchecked(RowId, SrcId, DstId);
1975 Graph->SetEdges(NumRows);
1976 Graph->SetMxEId(NumRows);
1980 for (
int CurrRowIdx = 0; CurrRowIdx < (Table->Next).Len(); CurrRowIdx++) {
1981 if ((Table->Next)[CurrRowIdx] == Table->Invalid) {
1984 for (
TInt ea_i = 0; ea_i < EdgeAttrV.
Len(); ea_i++) {
1985 TStr ColName = EdgeAttrV[ea_i];
1986 TAttrType T = Table->GetColType(ColName);
1987 TInt Index = Table->GetColIdx(ColName);
1990 Graph->AddIntAttrDatE(CurrRowIdx, Table->IntCols[Index][CurrRowIdx], ColName);
1993 Graph->AddFltAttrDatE(CurrRowIdx, Table->FltCols[Index][CurrRowIdx], ColName);
1996 Graph->AddStrAttrDatE(CurrRowIdx, Table->GetStrValIdx(Index, CurrRowIdx), ColName);
2006 #endif // GCC_ATOMIC
2009 template<
class PGraph>
2011 const TStr& SrcCol,
const TStr& DstCol,
2014 PGraph Graph = PGraph::TObj::New();
2016 const TAttrType NodeType = Table->GetColType(SrcCol);
2017 Assert(NodeType == Table->GetColType(DstCol));
2018 const TInt SrcColIdx = Table->GetColIdx(SrcCol);
2019 const TInt DstColIdx = Table->GetColIdx(DstCol);
2022 const TAttrType NodeTypeN = NodeTable->GetColType(NodeCol);
2023 const TInt NodeColIdx = NodeTable->GetColIdx(NodeCol);
2038 for (
int CurrRowIdx = 0; CurrRowIdx < (Table->Next).Len(); CurrRowIdx++) {
2039 if ((Table->Next)[CurrRowIdx] == Table->Invalid) {
2045 if (NodeType ==
atFlt) {
2046 TFlt FSVal = (Table->FltCols)[SrcColIdx][CurrRowIdx];
2047 SVal = Table->CheckAndAddFltNode(Graph, FltNodeVals, FSVal);
2048 TFlt FDVal = (Table->FltCols)[SrcColIdx][CurrRowIdx];
2049 DVal = Table->CheckAndAddFltNode(Graph, FltNodeVals, FDVal);
2051 else if (NodeType ==
atInt || NodeType ==
atStr) {
2052 if (NodeType ==
atInt) {
2053 SVal = (Table->IntCols)[SrcColIdx][CurrRowIdx];
2054 DVal = (Table->IntCols)[DstColIdx][CurrRowIdx];
2057 SVal = (Table->StrColMaps)[SrcColIdx][CurrRowIdx];
2059 DVal = (Table->StrColMaps)[DstColIdx][CurrRowIdx];
2062 if (!Graph->IsNode(SVal)) {Graph->AddNode(SVal); }
2063 if (!Graph->IsNode(DVal)) {Graph->AddNode(DVal); }
2069 Graph->AddEdge(SVal, DVal, CurrRowIdx);
2072 for (
TInt i = 0; i < EdgeAttrV.
Len(); i++) {
2073 TStr ColName = EdgeAttrV[i];
2074 TAttrType T = Table->GetColType(ColName);
2075 TInt Index = Table->GetColIdx(ColName);
2078 Graph->AddIntAttrDatE(CurrRowIdx, Table->IntCols[Index][CurrRowIdx], ColName);
2081 Graph->AddFltAttrDatE(CurrRowIdx, Table->FltCols[Index][CurrRowIdx], ColName);
2084 Graph->AddStrAttrDatE(CurrRowIdx, Table->GetStrValIdx(Index, CurrRowIdx), ColName);
2092 if (NodeAttrV.
Len() > 0) {
2093 for (
int CurrRowIdx = 0; CurrRowIdx < (NodeTable->Next).Len(); CurrRowIdx++) {
2094 if ((NodeTable->Next)[CurrRowIdx] == NodeTable->Invalid) {
2098 if (NodeTypeN ==
atInt) {
2099 NId = (NodeTable->IntCols)[NodeColIdx][CurrRowIdx];
2101 else if (NodeTypeN ==
atStr){
2102 NId = (NodeTable->StrColMaps)[NodeColIdx][CurrRowIdx];
2104 for (
TInt i = 0; i < NodeAttrV.
Len(); i++) {
2105 TStr ColName = NodeAttrV[i];
2106 TAttrType T = NodeTable->GetColType(ColName);
2107 TInt Index = NodeTable->GetColIdx(ColName);
2110 Graph->AddIntAttrDatN(NId, NodeTable->IntCols[Index][CurrRowIdx], ColName);
2113 Graph->AddFltAttrDatN(NId, NodeTable->FltCols[Index][CurrRowIdx], ColName);
2116 Graph->AddStrAttrDatN(NId, NodeTable->GetStrValIdx(Index, CurrRowIdx), ColName);
2130 template<
class PGraphMP>
2132 const TStr& SrcCol,
const TStr& DstCol,
2138 const TInt SrcColIdx = Table->GetColIdx(SrcCol);
2139 const TInt DstColIdx = Table->GetColIdx(DstCol);
2140 const TInt NumRows = Table->GetNumValidRows();
2142 const TAttrType NodeType = Table->GetColType(SrcCol);
2143 Assert(NodeType == Table->GetColType(DstCol));
2146 TIntV SrcCol1, EdgeCol1, EdgeCol2, DstCol2;
2148 const TAttrType NodeTypeN = NodeTable->GetColType(NodeCol);
2149 const TInt NodeColIdx = NodeTable->GetColIdx(NodeCol);
2154 #pragma omp parallel sections num_threads(4)
2157 { SrcCol1.Reserve(NumRows, NumRows); }
2159 { EdgeCol1.Reserve(NumRows, NumRows); }
2161 { DstCol2.Reserve(NumRows, NumRows); }
2163 { EdgeCol2.Reserve(NumRows, NumRows); }
2169 Table->GetPartitionRanges(Partitions, omp_get_max_threads());
2170 TInt PartitionSize = Partitions[0].GetVal2()-Partitions[0].GetVal1()+1;
2175 omp_set_num_threads(omp_get_max_threads());
2176 if (NodeType ==
atInt) {
2177 #pragma omp parallel for schedule(static)
2178 for (
int i = 0; i < Partitions.
Len(); i++) {
2181 while (RowI < EndI) {
2184 EdgeCol1[RowId] = RowId;
2186 EdgeCol2[RowId] = RowId;
2191 else if (NodeType ==
atStr) {
2192 #pragma omp parallel for schedule(static)
2193 for (
int i = 0; i < Partitions.
Len(); i++) {
2196 while (RowI < EndI) {
2199 EdgeCol1[RowId] = RowId;
2201 EdgeCol2[RowId] = RowId;
2209 omp_set_num_threads(omp_get_max_threads());
2210 #pragma omp parallel
2212 #pragma omp single nowait
2215 #pragma omp task untied shared(SrcCol1, EdgeCol1)
2219 #pragma omp single nowait
2222 #pragma omp task untied shared(EdgeCol2, DstCol2)
2227 #pragma omp taskwait
2233 TInt NumThreads = omp_get_max_threads();
2234 TInt PartSize = (NumRows/NumThreads);
2238 TIntV SrcOffsets, DstOffsets;
2240 for (
TInt i = 1; i < NumThreads; i++) {
2241 TInt CurrOffset = i * PartSize;
2242 while (CurrOffset < (i+1) * PartSize &&
2243 SrcCol1[CurrOffset-1] == SrcCol1[CurrOffset]) {
2247 if (CurrOffset < (i+1) * PartSize) { SrcOffsets.
Add(CurrOffset); }
2249 SrcOffsets.
Add(NumRows);
2252 for (
TInt i = 1; i < NumThreads; i++) {
2253 TInt CurrOffset = i * PartSize;
2254 while (CurrOffset < (i+1) * PartSize &&
2255 DstCol2[CurrOffset-1] == DstCol2[CurrOffset]) {
2259 if (CurrOffset < (i+1) * PartSize) { DstOffsets.
Add(CurrOffset); }
2261 DstOffsets.
Add(NumRows);
2263 TInt SrcPartCnt = SrcOffsets.
Len()-1;
2264 TInt DstPartCnt = DstOffsets.
Len()-1;
2267 TIntV SrcNodeCounts, DstNodeCounts;
2268 SrcNodeCounts.
Reserve(SrcPartCnt, SrcPartCnt);
2269 DstNodeCounts.
Reserve(DstPartCnt, DstPartCnt);
2271 #pragma omp parallel for schedule(dynamic)
2272 for (
int t = 0; t < SrcPartCnt+DstPartCnt; t++) {
2273 if (t < SrcPartCnt) {
2275 if (SrcOffsets[i] != SrcOffsets[i+1]) {
2276 SrcNodeCounts[i] = 1;
2277 TInt CurrNode = SrcCol1[SrcOffsets[i]];
2278 for (
TInt j = SrcOffsets[i]+1; j < SrcOffsets[i+1]; j++) {
2279 while (j < SrcOffsets[i+1] && SrcCol1[j] == CurrNode) { j++; }
2280 if (j < SrcOffsets[i+1]) {
2282 CurrNode = SrcCol1[j];
2287 TInt i = t - SrcPartCnt;
2288 if (DstOffsets[i] != DstOffsets[i+1]) {
2289 DstNodeCounts[i] = 1;
2290 TInt CurrNode = DstCol2[DstOffsets[i]];
2291 for (
TInt j = DstOffsets[i]+1; j < DstOffsets[i+1]; j++) {
2292 while (j < DstOffsets[i+1] && DstCol2[j] == CurrNode) { j++; }
2293 if (j < DstOffsets[i+1]) {
2295 CurrNode = DstCol2[j];
2302 TInt TotalSrcNodes = 0;
2304 for (
int i = 0; i < SrcPartCnt; i++) {
2305 SrcIdOffsets.
Add(TotalSrcNodes);
2306 TotalSrcNodes += SrcNodeCounts[i];
2309 TInt TotalDstNodes = 0;
2311 for (
int i = 0; i < DstPartCnt; i++) {
2312 DstIdOffsets.
Add(TotalDstNodes);
2313 TotalDstNodes += DstNodeCounts[i];
2319 TIntPrV SrcNodeIds, DstNodeIds;
2320 #pragma omp parallel sections
2323 { SrcNodeIds.
Reserve(TotalSrcNodes, TotalSrcNodes); }
2325 { DstNodeIds.
Reserve(TotalDstNodes, TotalDstNodes); }
2329 #pragma omp parallel for schedule(dynamic)
2330 for (
int t = 0; t < SrcPartCnt+DstPartCnt; t++) {
2331 if (t < SrcPartCnt) {
2333 if (SrcOffsets[i] != SrcOffsets[i+1]) {
2334 TInt CurrNode = SrcCol1[SrcOffsets[i]];
2335 TInt ThreadOffset = SrcIdOffsets[i];
2336 SrcNodeIds[ThreadOffset] =
TIntPr(CurrNode, SrcOffsets[i]);
2338 for (
TInt j = SrcOffsets[i]+1; j < SrcOffsets[i+1]; j++) {
2339 while (j < SrcOffsets[i+1] && SrcCol1[j] == CurrNode) { j++; }
2340 if (j < SrcOffsets[i+1]) {
2341 CurrNode = SrcCol1[j];
2342 SrcNodeIds[ThreadOffset+CurrCount] =
TIntPr(CurrNode, j);
2348 TInt i = t - SrcPartCnt;
2349 if (DstOffsets[i] != DstOffsets[i+1]) {
2350 TInt CurrNode = DstCol2[DstOffsets[i]];
2351 TInt ThreadOffset = DstIdOffsets[i];
2352 DstNodeIds[ThreadOffset] =
TIntPr(CurrNode, DstOffsets[i]);
2354 for (
TInt j = DstOffsets[i]+1; j < DstOffsets[i+1]; j++) {
2355 while (j < DstOffsets[i+1] && DstCol2[j] == CurrNode) { j++; }
2356 if (j < DstOffsets[i+1]) {
2357 CurrNode = DstCol2[j];
2358 DstNodeIds[ThreadOffset+CurrCount] =
TIntPr(CurrNode, j);
2370 Nodes.
Reserve(TotalSrcNodes+TotalDstNodes);
2373 while (i < TotalSrcNodes && j < TotalDstNodes) {
2374 if (SrcNodeIds[i].Val1 == DstNodeIds[j].Val1) {
2375 Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, j));
2378 }
else if (SrcNodeIds[i].Val1 < DstNodeIds[j].Val1) {
2379 Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, -1));
2382 Nodes.
Add(
TIntTr(DstNodeIds[j].Val1, -1, j));
2386 for (; i < TotalSrcNodes; i++) { Nodes.
Add(
TIntTr(SrcNodeIds[i].Val1, i, -1)); }
2387 for (; j < TotalDstNodes; j++) { Nodes.
Add(
TIntTr(DstNodeIds[j].Val1, -1, j)); }
2392 PGraphMP Graph = PGraphMP::TObj::New(NumNodes, NumRows);
2400 #pragma omp parallel for schedule(static,100)
2401 for (
int m = 0; m < NumNodes; m++) {
2405 Nodes[m].
GetVal(n, i, j);
2407 TInt Offset = SrcNodeIds[i].GetVal2();
2408 TInt Sz = EdgeCol1.Len()-Offset;
2409 if (i < SrcNodeIds.
Len()-1) { Sz = SrcNodeIds[i+1].GetVal2()-Offset; }
2414 TInt Offset = DstNodeIds[j].GetVal2();
2415 TInt Sz = EdgeCol2.Len()-Offset;
2416 if (j < DstNodeIds.
Len()-1) { Sz = DstNodeIds[j+1].GetVal2()-Offset; }
2420 Graph->AddNodeWithEdges(n, InVV[m], OutVV[m]);
2422 Graph->SetNodes(NumNodes);
2426 omp_set_num_threads(omp_get_max_threads());
2427 if (NodeType ==
atInt) {
2428 #pragma omp parallel for schedule(static)
2429 for (
int i = 0; i < Partitions.
Len(); i++) {
2432 while (RowI < EndI) {
2436 Graph->AddEdgeUnchecked(RowId, SrcId, DstId);
2441 else if (NodeType ==
atStr) {
2442 #pragma omp parallel for schedule(static)
2443 for (
int i = 0; i < Partitions.
Len(); i++) {
2446 while (RowI < EndI) {
2450 Graph->AddEdgeUnchecked(RowId, SrcId, DstId);
2457 Graph->SetEdges(NumRows);
2458 Graph->SetMxEId(NumRows);
2462 for (
int CurrRowIdx = 0; CurrRowIdx < (Table->Next).Len(); CurrRowIdx++) {
2463 if ((Table->Next)[CurrRowIdx] == Table->Invalid) {
2466 for (
TInt ea_i = 0; ea_i < EdgeAttrV.
Len(); ea_i++) {
2467 TStr ColName = EdgeAttrV[ea_i];
2468 TAttrType T = Table->GetColType(ColName);
2469 TInt Index = Table->GetColIdx(ColName);
2472 Graph->AddIntAttrDatE(CurrRowIdx, Table->IntCols[Index][CurrRowIdx], ColName);
2475 Graph->AddFltAttrDatE(CurrRowIdx, Table->FltCols[Index][CurrRowIdx], ColName);
2478 Graph->AddStrAttrDatE(CurrRowIdx, Table->GetStrValIdx(Index, CurrRowIdx), ColName);
2485 if (NodeAttrV.
Len() > 0) {
2486 for (
int CurrRowIdx = 0; CurrRowIdx < (NodeTable->Next).Len(); CurrRowIdx++) {
2487 if ((NodeTable->Next)[CurrRowIdx] == NodeTable->Invalid) {
2491 if (NodeTypeN ==
atInt) {
2492 NId = (NodeTable->IntCols)[NodeColIdx][CurrRowIdx];
2494 else if (NodeTypeN ==
atStr){
2495 NId = (NodeTable->StrColMaps)[NodeColIdx][CurrRowIdx];
2497 for (
TInt i = 0; i < NodeAttrV.
Len(); i++) {
2498 TStr ColName = NodeAttrV[i];
2499 TAttrType T = NodeTable->GetColType(ColName);
2500 TInt Index = NodeTable->GetColIdx(ColName);
2503 Graph->AddIntAttrDatN(NId, NodeTable->IntCols[Index][CurrRowIdx], ColName);
2506 Graph->AddFltAttrDatN(NId, NodeTable->FltCols[Index][CurrRowIdx], ColName);
2509 Graph->AddStrAttrDatN(NId, NodeTable->GetStrValIdx(Index, CurrRowIdx), ColName);
2520 #endif // GCC_ATOMIC
int GetPrimHashCd() const
TPair< TInt, TInt > TIntPr
Main namespace for all the Snap global entities.
enum TAttrType_ TAttrType
Types for tables, sparse and dense attributes.
int LoadModeNetToNet(PMMNet Graph, const TStr &Name, PTable Table, const TStr &NCol, TStrV &NodeAttrV)
Loads a mode, with name Name, into the PMMNet from the TTable. NCol specifies the node id column and ...
TInt GetIntAttr(TInt ColIdx) const
Returns value of integer attribute specified by integer column index for current row.
PGraphMP ToGraphMP(PTable Table, const TStr &SrcCol, const TStr &DstCol)
Performs table to graph conversion in parallel using the sort-first algorithm. This is the recommende...
TSizeTy Len() const
Returns the number of elements in the vector.
static PNGraphMP New()
Static constructor that returns a pointer to the graph. Call: PNGraphMP Graph = TNGraphMP::New().
void Start(const TExperiment Exp)
Start a new experiment.
TAttrAggr
Possible policies for aggregating node attributes.
const TDat & GetDat(const TKey &Key) const
Node iterator. Only forward iteration (operator++) is supported.
void CopyUniqueFrom(TVec< TVal, TSizeTy > &Vec, TInt Offset, TInt Sz)
Copy Sz values from Vec starting at Offset.
void Stop(const TExperiment Exp)
Stop the current experiment.
Iterator class for TTable rows.
const TVal & GetVal(const TSizeTy &ValN) const
Returns a reference to the element at position ValN in the vector.
int LoadCrossNetToNet(PMMNet Graph, const TStr &Mode1, const TStr &Mode2, const TStr &CrossName, PTable Table, const TStr &SrcCol, const TStr &DstCol, TStrV &EdgeAttrV)
Loads a crossnet from Mode1 to Mode2, with name CrossName, from the provided TTable. EdgeAttrV specifies edge attributes.
void Clr(const bool &DoDel=true, const TSizeTy &NoDelLim=-1)
Clears the contents of the vector.
PGraph ToGraph(PTable Table, const TStr &SrcCol, const TStr &DstCol, TAttrAggr AggrPolicy)
Sequentially converts the table into a graph with links from nodes in SrcCol to those in DstCol...
int LoadCrossNet(TCrossNet &Graph, PTable Table, const TStr &SrcCol, const TStr &DstCol, TStrV &EdgeAttrV)
Loads the edges from the TTable and EdgeAttrV specifies columns containing edge attributes.
PGraphMP ToNetworkMP(PTable Table, const TStr &SrcCol, const TStr &DstCol, TStrV &SrcAttrV, TStrV &DstAttrV, TStrV &EdgeAttrV, TAttrAggr AggrPolicy)
Does Table to Network conversion in parallel using the sort-first algorithm. This is the recommended ...
PGraph ToNetwork(PTable Table, const TStr &SrcCol, const TStr &DstCol, TStrV &SrcAttrV, TStrV &DstAttrV, TStrV &EdgeAttrV, TAttrAggr AggrPolicy)
Converts the Table into a graph with edges from SrcCol to DstCol, and attribute vector defined by the...
int LoadMode(TModeNet &Graph, PTable Table, const TStr &NCol, TStrV &NodeAttrV)
Loads the nodes specified in column NCol from the TTable with the attributes specified in NodeAttrV...
TInt GetRowIdx() const
Gets the id of the row pointed by this iterator.
TInt GetStrMapById(TInt ColIdx) const
Returns integer mapping of a string attribute value specified by string column index for current row...
static void QSortKeyVal(TIntV &Key, TIntV &Val, TInt Start, TInt End)
The nodes of one particular mode in a TMMNet, and their neighbor vectors as TIntV attributes...
PGraphMP ToGraphMP3(PTable Table, const TStr &SrcCol, const TStr &DstCol)
Performs table to graph conversion in parallel. Uses the hash-first method, which is less optimal...
TTriple< TInt, TInt, TInt > TIntTr
void Gen(const TSizeTy &_Vals)
Constructs a vector (an array) of _Vals elements.
void Reserve(const TSizeTy &_MxVals)
Reserves enough memory for the vector to store _MxVals elements.
static TStopwatch * GetInstance()
bool IsKey(const TKey &Key) const
TSizeTy Add()
Adds a new element at the end of the vector, after its current last element.
PGraphMP ToNetworkMP2(PTable Table, const TStr &SrcCol, const TStr &DstCol, TStrV &SrcAttrV, TStrV &DstAttrV, TStrV &EdgeAttrV, TAttrAggr AggrPolicy)
Implements table to network conversion in parallel. Not the recommended algorithm, using ToNetworkMP instead.
Implements a single CrossNet consisting of edges between two TModeNets (could be the same TModeNet) ...
Routines to benchmark table operations.